rs8274814 SNP Detail

Summary

• ID
  rs8274814
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31406789 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GCAGC AAGCACTTAG CCAGCACAGC
  Y
  ACCTTCCCAG CCCGAATTAG GTGTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/J	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	SM/J
ss12772107	Tmprss3_JC8197_1	ROCHEBIO	RPAMM	f	SNP	C			C	T	C
ss39529126	mCV24387611	ABI	CRAMUS_MOUSE	r	SNP		G	G		A		G
ss145457885	ENSMUSSNP3446870	ENSEMBL	ENSEMBL_Sanger	r	SNP		G	G				G
ss325358883	CHEV_17_31324760	CHEVERUD	SCREENING_POP	r	SNP								G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/J	BALB/cJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	SM/J
rs8274814					SNP	C	C	C	C	T	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31406789 () rs orientation: reverse

Symbol	Name	Function Class
Rr525395	regulatory region 525395	within coordinates
Rr525396	regulatory region 525396	194 bp distal
Tmprss3	transmembrane protease, serine 3	within coordinates
Tssr5079	transcription start site region 5079	1557 bp upstream
Tssr5080	transcription start site region 5080	1159 bp upstream