rs8274922 SNP Detail

Summary

• ID
  rs8274922
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:45091648 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        TTCAT GTTCCCTAGT GAGTTACCTG
  R
  TAGGCAAGAG CCTAAAAGTA GCTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss12772215	Tmprss4_JC8208_11	ROCHEBIO	RPAMM	f	SNP	A			G	G	G	G		G		G
ss46408895	mCV25159850	ABI	CRAMUS_MOUSE	r	SNP		T	C					C		C
ss136406292	ENSMUSSNP4447699	ENSEMBL	ENSEMBL_Sanger	r	SNP		T	C							C
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs8274922					SNP	A	A	G	G	G	G	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45091648 () rs orientation: reverse

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr677858	regulatory region 677858			1381 bp proximal
Smim35	small integral membrane protein 35			1657 bp upstream
Tmprss4	transmembrane protease, serine 4			Intron
				Noncoding-Transcript-Variant