rs8274930 SNP Detail

Summary

• ID
  rs8274930
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:45092361 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTGCTGGAT AGCAGGAATA
  GTCCCCACAT CAAGGCAGGC TGCCGTGGCC TCGCTTTCCT GGGCAGGGAC TCCTGGCCCA
  GAAGTGGAGC TCTGCAGAGG ACTAGGGGCC TGCTTTCCTC ACACCCAGCT CTGTCCCTGT
  CTCAGATGTC CCAGTATCTC GTTAGGGTCA CATCAGCAGG AGCAAAGAAG CAAGGGGACC
  M
  AGATGAACTC CTGTCTCAGC ACAGAGGGAA CTGGAGTGTG GACATTTGGT TTTCCATATA
  AGGGGCCTGG AGACAGGAGA AGCCTGGATC AATTCTTATA AGAGTCTGGA TGGAACTTCC
  TGAAACTTGG ACCGCCCTCT CCCTTCCTTT CTGCTAATCC ATGTTTGTCT TCTTTCAAAC
  TCCATATTCA AGTCTTCCTC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	SPRET/EiJ
ss12772223	Tmprss4_JC8209_4	ROCHEBIO	RPAMM	f	SNP	A	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	SPRET/EiJ
rs8274930					SNP	A	C	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45092361 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm57797	predicted gene, 57797			1389 bp upstream
Rr677858	regulatory region 677858			668 bp proximal
Rr677859	regulatory region 677859			1401 bp proximal
Smim35	small integral membrane protein 35			944 bp upstream
Tmprss4	transmembrane protease, serine 4			Intron
				Noncoding-Transcript-Variant