rs8274932 SNP Detail

Summary

• ID
  rs8274932
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:45092410 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCGCTTTCC TGGGCAGGGA
  CTCCTGGCCC AGAAGTGGAG CTCTGCAGAG GACTAGGGGC CTGCTTTCCT CACACCCAGC
  TCTGTCCCTG TCTCAGATGT CCCAGTATCT CGTTAGGGTC ACATCAGCAG GAGCAAAGAA
  GCAAGGGGAC CCAGATGAAC TCCTGTCTCA GCACAGAGGG AACTGGAGTG TGGACATTTG
  K
  TTTTCCATAT AAGGGGCCTG GAGACAGGAG AAGCCTGGAT CAATTCTTAT AAGAGTCTGG
  ATGGAACTTC CTGAAACTTG GACCGCCCTC TCCCTTCCTT TCTGCTAATC CATGTTTGTC
  TTCTTTCAAA CTCCATATTC AAGTCTTCCT CCTCCAGGAA GCCTTCCTTA ACTATTCTGT
  TCTCTGGCTC TTTCTTCACT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
ss12772225	Tmprss4_JC8209_6	ROCHEBIO	RPAMM	f	SNP	T			G	G	G	G	G	G		G
ss136406319	ENSMUSSNP5340292	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	G							G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129X1/SvJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	SPRET/EiJ
rs8274932					SNP	T	T	G	G	G	G	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45092410 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm57797	predicted gene, 57797			1340 bp upstream
Rr677858	regulatory region 677858			619 bp proximal
Rr677859	regulatory region 677859			1352 bp proximal
Smim35	small integral membrane protein 35			895 bp upstream
Tmprss4	transmembrane protease, serine 4			Intron
				Noncoding-Transcript-Variant