rs8274935 SNP Detail

Summary

• ID
  rs8274935
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:45092462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTAGGGGCCT GCTTTCCTCA
  CACCCAGCTC TGTCCCTGTC TCAGATGTCC CAGTATCTCG TTAGGGTCAC ATCAGCAGGA
  GCAAAGAAGC AAGGGGACCC AGATGAACTC CTGTCTCAGC ACAGAGGGAA CTGGAGTGTG
  GACATTTGGT TTTCCATATA AGGGGCCTGG AGACAGGAGA AGCCTGGATC AATTCTTATA
  M
  GAGTCTGGAT GGAACTTCCT GAAACTTGGA CCGCCCTCTC CCTTCCTTTC TGCTAATCCA
  TGTTTGTCTT CTTTCAAACT CCATATTCAA GTCTTCCTCC TCCAGGAAGC CTTCCTTAAC
  TATTCTGTTC TCTGGCTCTT TCTTCACTAA ATTTTCGTCT TTTGGATTTC CCCCTTCTTC
  TCCAGTCTGT CCTCTCAGGT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	SPRET/EiJ
ss12772228	Tmprss4_JC8209_9	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	C3H/HeJ	C57BL/6J	CAST/EiJ	SPRET/EiJ
rs8274935					SNP	A	A	A	A	A	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:45092462 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm57797	predicted gene, 57797			1288 bp upstream
Rr677858	regulatory region 677858			567 bp proximal
Rr677859	regulatory region 677859			1300 bp proximal
Smim35	small integral membrane protein 35			843 bp upstream
Tmprss4	transmembrane protease, serine 4			Intron
				Noncoding-Transcript-Variant