rs8275150 SNP Detail

Summary

• ID
  rs8275150
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:49013633 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTCCTTTTA AGAGACATGG
  CTCCAGGTGT GTCCTGATCC AGCCCGGGAT CGGCTGCATT ATCTTGAACA CTGAAACAAG
  ATCGCACCAA TGGCTACTGG ATCCCAGGGG TGAACTGGGT GAGGTGGCCT CACTTCCTAG
  CAATCAGGAG AAAGGTGCAC CATGGATACC TCATGGTCAT TGTCAGCTCT AACATGGTGA
  S
  AGCCTGAGAC TGCTGGGAAG CTTCCATAGA ACTCAGAGAC ATTTCCACAC ATGCTAATAT
  CTATCACTCT TTAATGCAGC CCTGTCAGCA AGAAGGGGAA CTGTGCTAGT ATATACAGGA
  GACACATTTT TTGGCACAAG AGACCTGGTT GCTAAGCAAC AGTAGCCTGC CCCACCTCCC
  TATTTTCTGT TTCCAAGCTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	CAST/EiJ	SPRET/EiJ
ss12772443	Tmprss5_JC8236_8	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	CAST/EiJ	SPRET/EiJ
rs8275150					SNP	C	C	C	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:49013633 () rs orientation: forward

Symbol	Name	Function Class
Rr678512	regulatory region 678512	within coordinates
Tmprss5	transmembrane protease, serine 5 (spinesin)	361 bp upstream
Tssr85008	transcription start site region 85008	387 bp upstream