rs8276440 SNP Detail

Summary

• ID
  rs8276440
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:47223887 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                 ACCTGC TCTGGGGACA GCAGCCTGAC ATCGATGAGG TTTCGGTCAT
  AGGGCACAAA GGACACCAAT TCAAAAGTCA GGTAGTCCCC TGGGTACTGA ATTTNCATAG
  GGAAGNTAAG AAAGCAAAAA AAGTGAGAGA GGCTGAGACA CTGGCTGGAA GGAGTCAGGA
  S
  CCGCCGAGGG GAGGGAGTGA TCCTTGCCAG CTCTGCTAGA CTTGAGCATT CTAGAGTCCN
  NTTCTCTTGG CCAGTTCTCT TGTCTACTGC CCAGCATCCT ATTTCCTGCT TCCTGAAAGA
  TTAGACTCAT GTTTGATTCT CAGAGTGTGA GCATCAACAG TGTGTAGGGA GCACNTTAAA
  CATTTGGGTT GTAGGNAGTA CTTCCAAGAC CCACTGGAGG TAGAACATCT AGGGCACGAC
  CTTAGGANAT ATGTACCTAT GTTTAAATAG CCTCGAAATG TTATTTAATC TCatctatct
  atctatctat ctatctatct atctatctat ctatctatct atcnatctat ctatctttct
  atctGTAGGT CCGTTCTCTT GTTGGCCAGG ATGCCTTCAA ATTCACTG             
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12773746	Xpnpep2_JC8415_3	ROCHEBIO	RPAMM	f	SNP	C	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8276440					SNP	C	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:47223887 () rs orientation: reverse

Symbol	Name	Function Class
Gm61910	predicted gene, 61910	within coordinates
Rr5885	regulatory region 5885	1714 bp proximal
Rr370553	regulatory region 370553	1941 bp upstream
Xpnpep2	X-prolyl aminopeptidase (aminopeptidase P) 2, membrane-bound	within coordinates