rs8277613 SNP Detail

Summary

• ID
  rs8277613
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:92549442 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                              ACCGAATTTG AAATAAGAAA
  GATCACCTTT CCCTCCAACA TAGGGGAGAG ACAGAGAAAA GGATGGTTAC TTAAAACTAA
  AAGGAAGTTC TTTCTTGTGA TATAAATTGA TCCTTGTTCA TTCTTCTTCC TATGAAGCTC
  ATCAGCATCA TTTCAAAAAC AGAGGCAGAG ATGGAAATTT GATTGTTGTT TGAGTTGTCC
  S
  CTAAAGCTGT GGAAAGGCAT GGTCTTCGAC CTTGTTCGGT ATTGCACTAG CCACCTGTTA
  GGATTGTTCT CATTCAAGGT CATTATGTGG TGCCTGGCTG TCTGACTGGC AGCCTGTGTC
  AGATTTGCCA GTGGCCCCTC ATTTGTATCA CCCCTGCCAA TTTTGACAGA AAGAATGGAG
  ACATGCTAGC TGAAAGGGAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12774948	Pola1_AN4744_5	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	G	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8277613					SNP	G	G	G	G	G	G	G	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:92549442 () rs orientation: reverse

Symbol	Name	Function Class
Pola1	polymerase (DNA directed), alpha 1	within coordinates