rs8277780 SNP Detail

Summary

• ID
  rs8277780
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  ChrX:92550688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAGTAGAT CAGATTGCTG
  TCAGCTGTGA AAGAGCCAGC ACTTCAGCTG CTTCTCATTC TTTATTTTTA AATGGCAGAA
  TGGGCTCAAG GGCAGGGTGG CCTGTCACAC ACAAAGACAC TAAGGAATTT TAAAGATAAA
  AATCAAAACA CTTAAGGGTG CGCAAGCTCA AATAGAACTA AGGAACCGAA CAAATGCTTC
  M
  AAAAAGCACA TGAGCATAAG AGTATTTCAC AAAAAACAAA AACAAAAACA AAAACAAAAA
  CCAGTCACTA AAGGACTTCT CTTATTAACA TAGTAAAGGG GAAACTAAAA AATTTGGAGC
  AAAAATGTCA AAACTACAAA TCTCTTCATC ATCGATTGGA CTCTAAAATG CTTGGTTTTA
  GAACTCTGAG AAGAGAGCAT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12775118	Pola1_AN4791_5	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8277780					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:92550688 () rs orientation: forward

Symbol	Name	Function Class
Pola1	polymerase (DNA directed), alpha 1	within coordinates