rs8279234 SNP Detail

Summary

• ID
  rs8279234
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82273183 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCCAGGATA GCACCACACA CATGCTCTTC CTGATTTGGG
  CTCCCAAGTG CTGAAACTGC AGCCCCATAA CAATGGTCCA GGCTCAGAAC ATACTTTGAT
  Y
  ATAGCAGTCA AGTTGGCCCT TGAGGAAAGA TGAGGCAGGT GGGAAGGTTG GTTGGAGACT
  ATTGTCTGAG GACTCACCAA GAGAGGGCTG GGGTTGAAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MRL/MpJ	MSM/Ms	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	SM/J	SPRET/EiJ	WSB/EiJ
ss12776665	M24264_AN975_1	ROCHEBIO	RPAMM	f	SNP	T			T	T	T	C	T	T		T	C	C	T					C			T	T			C
ss48077964	NES12071890	PERLEGEN	MM_PANEL2	f	SNP		T			T	T		T		T	T		C	T	C	T		T			T			T			C
ss148231996	ENSMUSSNP5419985	ENSEMBL	ENSEMBL_Sanger	f	SNP			T		T									T						T
ss325034571	CHEV_15_82219412	CHEVERUD	SCREENING_POP	f	SNP																	C								T
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	MRL/MpJ	MSM/Ms	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	SM/J	SPRET/EiJ	WSB/EiJ
rs8279234					SNP	T	T	T	T	T	T	C	T	T	T	T	C	C	T	C	T	C	T	C	T	T	T	T	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48077964	NES12071890	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82273183 () rs orientation: forward

Symbol	Name	Function Class
Cyp2d11	cytochrome P450, family 2, subfamily d, polypeptide 11	172 bp downstream