rs8279236 SNP Detail

Summary

• ID
  rs8279236
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82273367 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                         TTTTAGCAC CANACACATG CTCTTCCTGA TTTGGGCTCC
  CAAGTGCTGA AACTGTAGCC CCATAACAAT GGTCCAGGCT CAGAACATAC TTTGATNANA
  GCAGTCAAGT TGGCCCTTGA GGAGAGATGA GGCAGGTGGG AAGGTTGGTT GGAGACTATT
  GTCTGAGGAC TCACCAAGAG AGGGCTGGGG TTGAAGCAGA AAACAGCAGC AACCACAAAT
  CTGGTTTATT TTGCCTGGCT CAGCCTGCCC TGCCTAACAT GTCTGGAATT AGTGTNCTTG
  Y
  TCANGCATCA CAGCACAGAG CTGGTAGGGG AAGGGGGCAA CTGGAATAGC ATGGNCTCTA
  TAGTTGCTGG GCTGGGGCTG TCCATCAGGC ACTGAGATGC TAAAGCGC             
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
ss12776667	M24264_AN975_3	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	NZW/Lac	SPRET/EiJ
rs8279236					SNP	C	C	C	C	C	C	C	C	C	T	C	C	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82273367 () rs orientation: forward

Symbol	Name	Function Class
Cyp2d11	cytochrome P450, family 2, subfamily d, polypeptide 11	within coordinates