rs8279288 SNP Detail

Summary

• ID
  rs8279288
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:82274002 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACCTCAACCC CTGAGCCTCT CAGCACTTTG CAGGGCCCTG
  TAAAGATCAA CCGTTGGTTG ACCTGCCCAG CAACCATCCA TGTGTGCAAT GCTCTATAAA
  K
  TGCCCTTTGG CCATTTTCTT TCACATTTCT CTTTCTTGAG GACTCTAAAA GGCTGCAGCA
  TGCGTGAACT CTGTTTTTTT GTTTTTGTTT TTGTTTTGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss12776721	M24264_AN981_5	ROCHEBIO	RPAMM	f	SNP	G			G	G	G	T	G	G		G		G	G			T		G	G
ss39310221	mCV22668359	ABI	CRAMUS_MOUSE	f	SNP					G							T		G
ss48077970	NES12071894	PERLEGEN	MM_PANEL2	f	SNP		G			G	G		G		G	G			G		G		G			G	G		T
ss148232055	ENSMUSSNP813274	ENSEMBL	ENSEMBL_Sanger	f	SNP			G		G									G
ss325034581	CHEV_15_82220231	CHEVERUD	SCREENING_POP	f	SNP															T								G
SNP Consensus Information
SNP					Consensus Type	129/Sv	129S1/SvImJ	129X1/SvJ	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	MRL/MpJ	NOD/ShiLtJ	NZB/BlNJ	NZW/Lac	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs8279288					SNP	G	G	G	G	G	G	T	G	G	G	G	T	G	G	T	G	T	G	G	G	G	G	G	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss48077970	NES12071894	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:82274002 () rs orientation: forward

Symbol	Name	Function Class
Cyp2d11	cytochrome P450, family 2, subfamily d, polypeptide 11	within coordinates