rs8279819 SNP Detail

Summary

• ID
  rs8279819
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79490402 (GRCm39)
• SNP Orientation to the Genome
  reverse

• SNP Reference Flanking Sequence

                                        GTAGA ACAGGCTGGC CTCAAACTCA
  Y
  AGACACCCAC TTGTCTCTGT TCCTC                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12777294	Anpep_AN5129_2	ROCHEBIO	RPAMM	f	SNP	C	C	C	C	T	T	C	C	C
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	CAST/EiJ	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8279819					SNP	C	C	C	C	T	T	C	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79490402 () rs orientation: reverse

Symbol	Name	Function Class
Anpep	alanyl aminopeptidase, membrane	within coordinates
Gm71751	predicted gene, 71751	1765 bp upstream
Tssr67371	transcription start site region 67371	1175 bp upstream
Tssr67372	transcription start site region 67372	1363 bp upstream
Tssr67373	transcription start site region 67373	1823 bp upstream
Tssr67374	transcription start site region 67374	1869 bp upstream
Tssr67375	transcription start site region 67375	1903 bp upstream
Tssr73155	transcription start site region 73155	1962 bp upstream
Tssr73156	transcription start site region 73156	1898 bp upstream
Tssr73157	transcription start site region 73157	1700 bp upstream
Tssr73158	transcription start site region 73158	1450 bp upstream
Tssr73159	transcription start site region 73159	1400 bp upstream
Tssr73160	transcription start site region 73160	1156 bp upstream
Tssr73161	transcription start site region 73161	249 bp downstream
Tssr73162	transcription start site region 73162	266 bp downstream
Tssr73163	transcription start site region 73163	325 bp downstream
Tssr73164	transcription start site region 73164	470 bp downstream
Tssr73165	transcription start site region 73165	1031 bp downstream
Tssr73166	transcription start site region 73166	1072 bp downstream
Tssr73167	transcription start site region 73167	1280 bp downstream
Tssr73168	transcription start site region 73168	1292 bp downstream
Tssr73169	transcription start site region 73169	1320 bp downstream
Tssr73170	transcription start site region 73170	1351 bp downstream
Tssr73171	transcription start site region 73171	1422 bp downstream
Tssr73172	transcription start site region 73172	1450 bp downstream
Tssr73173	transcription start site region 73173	1466 bp downstream
Tssr73174	transcription start site region 73174	1554 bp downstream
Tssr73175	transcription start site region 73175	1575 bp downstream
Tssr73176	transcription start site region 73176	1633 bp downstream
Tssr73177	transcription start site region 73177	1663 bp downstream
Tssr73178	transcription start site region 73178	1689 bp downstream
Tssr73179	transcription start site region 73179	1753 bp downstream
Tssr73180	transcription start site region 73180	1820 bp downstream
Tssr73181	transcription start site region 73181	1903 bp downstream
Tssr73182	transcription start site region 73182	1922 bp downstream
Tssr73183	transcription start site region 73183	1961 bp downstream