rs8279820 SNP Detail

Summary

• ID
  rs8279820
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79492221 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGGAATAGCT CAGGCCAAGA
  GGAAAGAACA GCAGCCCCGG GGCCAGCTTA TATCCTCACA GGGGGTGGAG CCCCACTGCC
  TTTGGGTCGG ACAAATATTA ACCAGAGCTC AGGCGAAGGT CACTAGGCTG GACAGGGGTA
  CGCTCTGCCC AGGCTCTGGA GAGATCAGAA ATGAAACAGT GTGCAGAGCT GGCTTGGGGT
  R
  AGGGATGGGG GATGGGGGTG GGCAGGGGAG ATGCCTGCTG TAACCAACAC AGTGTGTGGT
  TACGACTGCA GGTGGCCTGG ATGGAGAGGG GGGAGTGGGG GTGGGAAATC AGCTAGAGCG
  GGGGCTGAAG GGCAGGCTGC AGACTTGGCA CCTAGAGGCA GGGGGGAAGG CAGTGACGGT
  AATCTACCTG CAAGGAGAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	SPRET/EiJ
ss12777295	Anpep_AN5131_1	ROCHEBIO	RPAMM	f	SNP	A	A	A	A	A	A	A	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	A/HeJ	A/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cByJ	BALB/cJ	C3H/HeJ	C57BL/6J	CAST/EiJ	DBA/2J	NZB/BlNJ	SPRET/EiJ
rs8279820					SNP	A	A	A	A	A	A	A	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79492221 () rs orientation: forward

Symbol	Name	Function Class
Anpep	alanyl aminopeptidase, membrane	within coordinates
Gm71751	predicted gene, 71751	within coordinates
Tssr67371	transcription start site region 67371	634 bp downstream
Tssr67372	transcription start site region 67372	383 bp downstream
Tssr67373	transcription start site region 67373	4 bp upstream
Tssr67374	transcription start site region 67374	50 bp upstream
Tssr67375	transcription start site region 67375	84 bp upstream
Tssr73161	transcription start site region 73161	1556 bp upstream
Tssr73162	transcription start site region 73162	1498 bp upstream
Tssr73163	transcription start site region 73163	1477 bp upstream
Tssr73164	transcription start site region 73164	1314 bp upstream
Tssr73165	transcription start site region 73165	768 bp upstream
Tssr73166	transcription start site region 73166	736 bp upstream
Tssr73167	transcription start site region 73167	534 bp upstream
Tssr73168	transcription start site region 73168	513 bp upstream
Tssr73169	transcription start site region 73169	476 bp upstream
Tssr73170	transcription start site region 73170	457 bp upstream
Tssr73171	transcription start site region 73171	372 bp upstream
Tssr73172	transcription start site region 73172	360 bp upstream
Tssr73173	transcription start site region 73173	342 bp upstream
Tssr73174	transcription start site region 73174	256 bp upstream
Tssr73175	transcription start site region 73175	228 bp upstream
Tssr73176	transcription start site region 73176	171 bp upstream
Tssr73177	transcription start site region 73177	145 bp upstream
Tssr73178	transcription start site region 73178	119 bp upstream
Tssr73179	transcription start site region 73179	54 bp upstream
Tssr73180	transcription start site region 73180	1 bp downstream
Tssr73181	transcription start site region 73181	84 bp downstream
Tssr73182	transcription start site region 73182	103 bp downstream
Tssr73183	transcription start site region 73183	142 bp downstream
Tssr73184	transcription start site region 73184	802 bp downstream