rs8279822 SNP Detail

Summary

• ID
  rs8279822
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  118
• Last Updated in dbSNP Build
  118
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:79492480 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                         TTTGGGGAA GGCAGTGACG GTAATCTACC TGCAAGGAGA
  AATGGAGAGA ACAGACTCAT GAGGACNGAG GTTAGACTCA GGGAAAGATT CCCCAGGCTC
  S
  AGAGGTAAGG CAGGCAGAGC AGAATGAAGC CAGTTCCCAG CAGGCCATCA AAAGCATACC
  AGCTCCACCT CTGGGTTCCT CAACAGATGC CAGGGGCCCC TTGGGACAGT CTTCAGATAA
  A                                                                
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
ss12777297	Anpep_AN5132_2	ROCHEBIO	RPAMM	f	SNP	G	G	G	G	G	G	C	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129/Sv	A/HeJ	A/J	AKR/J	B10.D2-Hc<0> H2 H2-T18/oSnJ	BALB/cJ	C57BL/6J	DBA/2J	MRL/MpJ	NZB/BlNJ	SPRET/EiJ
rs8279822					SNP	G	G	G	G	G	G	C	G	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:79492480 () rs orientation: forward

Symbol	Name	Function Class
Anpep	alanyl aminopeptidase, membrane	within coordinates
Gm71751	predicted gene, 71751	within coordinates
Tssr67371	transcription start site region 67371	893 bp downstream
Tssr67372	transcription start site region 67372	642 bp downstream
Tssr67373	transcription start site region 67373	223 bp downstream
Tssr67374	transcription start site region 67374	183 bp downstream
Tssr67375	transcription start site region 67375	147 bp downstream
Tssr73161	transcription start site region 73161	1815 bp upstream
Tssr73162	transcription start site region 73162	1757 bp upstream
Tssr73163	transcription start site region 73163	1736 bp upstream
Tssr73164	transcription start site region 73164	1573 bp upstream
Tssr73165	transcription start site region 73165	1027 bp upstream
Tssr73166	transcription start site region 73166	995 bp upstream
Tssr73167	transcription start site region 73167	793 bp upstream
Tssr73168	transcription start site region 73168	772 bp upstream
Tssr73169	transcription start site region 73169	735 bp upstream
Tssr73170	transcription start site region 73170	716 bp upstream
Tssr73171	transcription start site region 73171	631 bp upstream
Tssr73172	transcription start site region 73172	619 bp upstream
Tssr73173	transcription start site region 73173	601 bp upstream
Tssr73174	transcription start site region 73174	515 bp upstream
Tssr73175	transcription start site region 73175	487 bp upstream
Tssr73176	transcription start site region 73176	430 bp upstream
Tssr73177	transcription start site region 73177	404 bp upstream
Tssr73178	transcription start site region 73178	378 bp upstream
Tssr73179	transcription start site region 73179	313 bp upstream
Tssr73180	transcription start site region 73180	223 bp upstream
Tssr73181	transcription start site region 73181	157 bp upstream
Tssr73182	transcription start site region 73182	145 bp upstream
Tssr73183	transcription start site region 73183	106 bp upstream
Tssr73184	transcription start site region 73184	543 bp downstream
Tssr73185	transcription start site region 73185	1792 bp downstream